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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIGT, phosphatidylinositol glycan anchor biosynthesis, class T
Sequence ID:NM_001184728
NM_001184729
NM_001184730
NM_015937
NR_047691
NR_047692
NR_047693
NR_047694
NR_047695
Entrez Gene ID:51604
Ensembl ID:ENSG00000124155

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, adrenal medulla, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q12-q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 44044796 - 44054466

 Exon Info From UCSC:
NM_001184728
NM_001184729
NM_001184730
NM_015937

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3921680Full LengthBC015022phosphatidylinositol glycan anchor biosynthesis, class T
9020818Full LengthBC136827phosphatidylinositol glycan anchor biosynthesis, class T
9020819Full LengthBC136828phosphatidylinositol glycan anchor biosynthesis, class T
5755895IncompleteBC110892phosphatidylinositol glycan anchor biosynthesis, class T

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057021  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001184728 NP_001171657    
NM_001184729 NP_001171658    
NM_001184730 NP_001171659    
NM_015937 NP_057021 Q969N2 Gpi16

Related Sequences

 
mRNAGenPeptSwissProt
AF132940 AAD27715 Q969N2
BC015022 AAH15022 Q969N2
BC110892 AAI10893 Q969N2
BC136827 AAI36828 Q969N2
BC136828 AAI36829 Q969N2
AF305815 AAK55518 Q96JR8
AY358588 AAQ88951 Q969N2
AB057724 BAB60854 Q969N2
AK075469 BAC11639 Q969N2
AK293294 BAH11487 B7Z1F1
AK293686 BAH11569 B7Z1N3
AK296063 BAH12247 B7Z3L1
AK296139 BAH12267 Q969N2
AK297830 BAH12673 B7Z4T7
AK299013 BAH12928 B7Z1N3
AK301815 BAH13561 B7Z7C5
AK302093 BAH13624 Q969N2
AK316358 BAH14729 B7ZAP3
AL121742 CAB57341 Q969N2
BX537612 CAD97799 Q969N2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIGT NP_057021 M.musculus Pigt 78928 Gene Info NP_598540 94
R.norvegicus Pigt 296360   NP_001100010 94
A.gambiae AgaP_AGAP008540 1275401   XP_314651 42
D.melanogaster CG11190 31772   NP_572475 40
A.thaliana AT3G07140 819900   NP_566299 38
N.crassa NCU05644 3876343   XP_960205 38
S.cerevisiae GPI16 856595   NP_012058 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)