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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ASAP3, ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
Sequence ID:NM_001143778
NM_017707
Entrez Gene ID:55616
Ensembl ID:ENSG00000088280

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 23755055 - 23810671

 Exon Info From UCSC:
NM_001143778
NM_017707

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298355Full LengthBC060786ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
6377039IncompleteBC052305ArfGAP with SH3 domain, ankyrin repeat and PH domain 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060177  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001143778 NP_001137250    
NM_017707 NP_060177 Q8TDY4 Ank
PH
ArfGap

Related Sequences

 
mRNAGenPeptSwissProt
BC023519 AAH23519 Q6PJ46
BC052305 AAH52305 Q8TDY4
BC060786 AAH60786 Q8TDY4
AK000206 BAA91008 Q8TDY4
AK000253 BAA91033 Q9NXH7
AB056749 BAB85677 Q8TDY4
AK092291 BAG52522 Q8TDY4
AK295100 BAG58136 Q8TDY4
AK299359 BAG61354 B4DRP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASAP3 NP_060177 M.musculus Asap3 230837 Gene Info NP_001008233 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)