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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2BK, histone cluster 1, H2bk
Sequence ID:NM_080593
Entrez Gene ID:85236
Ensembl ID:ENSG00000197903

Database Links

UniGeneEntrez GeneEnsembl GeneDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 27106077 - 27114590

NM_080593 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
264132710607227106459
4148632711418727114636

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3463930Full LengthBC000893histone cluster 1, H2bk
4707078Full LengthBC108737histone cluster 1, H2bk
6093977Full LengthBC064959histone cluster 1, H2bk
6526835Full LengthBC051872histone cluster 1, H2bk

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542160  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080593 NP_542160 O60814 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC000893 AAH00893 O60814
BC051872 AAH51872 O60814
BC064959 AAH64959 O60814
BC108737 AAI08738 O60814
EU446970 ABZ92499  
AK292062 BAF84751 O60814
AJ223352 CAA11276 O60814

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2BK NP_542160 H.sapiens HIST1H2BJ 8970 Gene Info NP_066402 99
M.musculus Hist2h2be 319190 Gene Info NP_835586 97
R.norvegicus Hist2h2be 295274   XP_227459 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)