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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POLR2M, polymerase (RNA) II (DNA directed) polypeptide M
Sequence ID:NM_001018102
NM_015532
NR_027390
RefSeqGene ID:NG_029676
Entrez Gene ID:81488
Ensembl ID:ENSG00000255529

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 58009112 - 58009753

 Exon Info From UCSC:
NM_001018102
NM_015532

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504557Full LengthBC001510glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A
5262574IncompleteBC050322glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001018090 NP_001018100    
NM_001018091 NP_001018101    
NM_001018100 NP_001018110 P0CAP1  
NM_001018102 NP_001018112    
NM_015532 NP_056347 P0CAP2  
NM_152451 NP_689664    

Related Sequences

 
mRNAGenPeptSwissProt
BC001510 AAH01510 P0CAP2
BC101645 AAI01646 P0CAP1
BC112148 AAI12149 P0CAP1
AF326773 AAK92284 P0CAP2
AY207007 AAO39707 P0CAP1
P0CAP2
AY207459 AAP41548 P0CAP1
AY208913 AAP41549 P0CAP1
AY237639 AAP75897 P0CAP1
AY331564 AAQ76825 P0CAP1
AY333779 AAQ76826 P0CAP1
AY334560 AAQ76827 P0CAP1
AY334561 AAQ76828 P0CAP1
AY334562 AAQ76829 P0CAP1
AY341344 AAQ76830 Q6EEV4
AY341345 AAQ76831 P0CAP1
AY353056 AAQ76832 P0CAP1
AY353057 AAQ76833 P0CAP1
AY353058 AAQ76834 P0CAP1
AY353060 AAQ76836 P0CAP1
AY353061 AAQ76837 P0CAP2
AY339380 AAQ82540 Q6EEV4
AY350748 AAQ82541 Q6EES4
DQ893035 ABM83961  
DQ896276 ABM87275  
FJ970029 ADA68358 P0CAP1
JF419331 AEB96260 H8Y6P7
AK055535 BAB70944 P0CAP1
AK074767 BAC11193 P0CAP2
AK074955 BAC11313 P0CAP2
AK128618 BAC87533 P0CAP2
AK223571 BAD97291 Q53ER8
AL050091 CAB43263 P0CAP2
AM392721 CAL37599 P0CAP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POLR2M NP_056347 R.norvegicus Polr2m 192147   NP_899652 73
M.musculus Polr2m 28015 Gene Info NP_848717 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)