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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACADVL, acyl-CoA dehydrogenase, very long chain
Sequence ID:NM_000018
NM_001033859
NM_001270447
NM_001270448
RefSeqGene ID:NG_007975
Entrez Gene ID:37
Ensembl ID:ENSG00000072778

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
VLCAD DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7123256 - 7128584

 Exon Info From UCSC:
NM_000018
NM_001033859

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822593Full LengthBC000399acyl-Coenzyme A dehydrogenase, very long chain
4471040Full LengthBC012912acyl-Coenzyme A dehydrogenase, very long chain
5090104Full LengthBC020218acyl-Coenzyme A dehydrogenase, very long chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000009  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000018 NP_000009 P49748 EC 1.3.8.9 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
NM_001033859 NP_001029031      
NM_001270447 NP_001257376      
NM_001270448 NP_001257377      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC000399 AAH00399 P49748 EC 1.3.8.9
BC012912 AAH12912 P49748 EC 1.3.8.9
BC020218 AAH20218 P49748 EC 1.3.8.9
D43682 BAA07781 P49748 EC 1.3.8.9
AK222518 BAD96238 Q53HR2  
AK056083 BAG51618 B3KPA6  
AK056956 BAG51833 B3KPX1  
AK293549 BAG57027 B4DEB6  
AK302653 BAG63892 B4DYY0  
X86556 CAA60253 P49748 EC 1.3.8.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACADVL NP_000009 R.norvegicus Acadvl 25363   NP_037023 85
M.musculus Acadvl 11370 Gene Info NP_059062 84
D.melanogaster CG7461 37217   NP_611409 58
A.gambiae AgaP_AGAP008769 1275626   XP_314893 56
C.elegans acdh-12 174180   NP_001022062 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)