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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GTPBP6, GTP binding protein 6 (putative)
Sequence ID:NM_012227
Entrez Gene ID:8225
Ensembl ID:ENSG00000178605

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.33; Yp11.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 221425 - 230887


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3528598Full LengthBC014636GTP binding protein 6 (putative)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012227 NP_036359 O43824 MMR_HSR1

Related Sequences

 
mRNAGenPeptSwissProt
BC014636 AAH14636 O43824
BT007360 AAP36024 O43824
AK074528 BAC11041 Q8N2Q6
AK223412 BAD97132 O43824
AK296003 BAG58777 B4DJB5
AK298260 BAG60524 B4DPB2
Y14391 CAA74749 O43824

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTPBP6 NP_036359 M.musculus Gtpbp6 107999 Gene Info NP_660129 64
R.norvegicus Gtpbp6 363931   NP_001129312 63
A.gambiae AgaP_AGAP003969 1278789   XP_318421 43
D.melanogaster CG5116 43081   NP_651399 42
C.elegans F46B6.4 179372   NP_505523 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)