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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PHACTR1, phosphatase and actin regulator 1
Sequence ID:NM_001242648
NM_030948
Entrez Gene ID:221692
Ensembl ID:ENSG00000112137

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 12717832 - 13287428


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069032Full LengthBC101526phosphatase and actin regulator 1
8069034Full LengthBC101528phosphatase and actin regulator 1
4445989IncompleteBC047159phosphatase and actin regulator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112210  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242648 NP_001229577    
NM_030948 NP_112210 Q9C0D0 RPEL

Related Sequences

 
mRNAGenPeptSwissProt
BC101526 AAI01527 Q9C0D0
BC101528 AAI01529 Q9C0D0
AB051520 BAB21824 Q9C0D0
AK290017 BAF82706 Q9C0D0
AK090769 BAG52223 Q9C0D0
AK295263 BAG58252 B4DHU0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHACTR1 NP_001229577 R.norvegicus Phactr1 306844   NP_999622 97
M.musculus Phactr1 218194 Gene Info NP_940811 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)