Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMO4, LIM domain only 4
Sequence ID:NM_006769
Entrez Gene ID:8543
Ensembl ID:ENSG00000143013

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 87794548 - 87810757

NM_006769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17778779415087794926
77810168779769587797933
101711138780521887805314
111412698780572987805884
127054028781047087814602

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3355972Full LengthBC003600LIM domain only 4
3893112Full LengthBC017673LIM domain only 4
6196307Full LengthBC065818LIM domain only 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006760  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006769 NP_006760 P61968 LIM

Related Sequences

 
mRNAGenPeptSwissProt
U24576 AAB51073 P61968
BC003600 AAH03600 P61968
BC017673 AAH17673 P61968
BC065818 AAH65818 P61968
DQ891447 ABM82373  
DQ894626 ABM85552  
AK292578 BAF85267 A8K963

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMO4 NP_006760 M.musculus Lmo4 16911 Gene Info NP_034853 100
R.norvegicus Lmo4 362051   NP_001009708 100
D.melanogaster CG5708 34361   NP_609359 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)