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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPHKAP, SPHK1 interactor, AKAP domain containing
Sequence ID:NM_001142644
NM_030623
Entrez Gene ID:80309
Ensembl ID:ENSG00000153820

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 228844673 - 228884464

 Exon Info From UCSC:
NM_001142644
NM_030623

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143957Full LengthBC104954SPHK1 interactor, AKAP domain containing
8143959Full LengthBC104956SPHK1 interactor, AKAP domain containing

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142644 NP_001136116 Q2M3C7  
NM_030623 NP_085126    

Related Sequences

 
mRNAGenPeptSwissProt
BC104954 AAI04955 Q2M3C7
BC104956 AAI04957 Q2M3C7
HQ258692 ADR83443  
AB051465 BAB21769 Q2M3C7
AK090876 BAG52242 B3KR30
CR749297 CAH18152 Q2M3C7
CR749494 CAH18317 Q2M3C7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPHKAP NP_001136116 M.musculus Sphkap 77629 Gene Info NP_766018 73
R.norvegicus Sphkap 316561   NP_001120964 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta