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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATAD1, ATPase family, AAA domain containing 1
Sequence ID:NM_032810
Entrez Gene ID:84896
Ensembl ID:ENSG00000138138

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 89512873 - 89574639

NM_032810 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116908951287489514563
169118248951654589516678
182518758952742989527479
187619658953070889530797
196620728953607789536183
207322738954422689544426
227423948955006689550186
239524938955241389552511
249426688957419489574368
266930348957755189577916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6199813Full LengthBC073998ATPase family, AAA domain containing 1
4386512IncompleteBC063530ATPase family, AAA domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116199  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_032810 NP_116199 Q8NBU5 EC 3.6.1.3 AAA

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC010868 AAH10868 Q8NBU5 EC 3.6.1.3
BC063530 AAH63530 Q8NBU5 EC 3.6.1.3
BC073998 AAH73998 Q8NBU5 EC 3.6.1.3
AF361493 AAL57218 Q8NBU5 EC 3.6.1.3
AK027506 BAB55161 Q8NBU5 EC 3.6.1.3
AK075223 BAC11482 Q8NBU5 EC 3.6.1.3
AK304297 BAG65153 B4E2J1  
AL834370 CAD39033 Q8NBU5 EC 3.6.1.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATAD1 NP_116199 M.musculus Atad1 67979 Gene Info NP_080763 100
R.norvegicus Atad1 309532   NP_001030174 100
A.gambiae AgaP_AGAP009625 1279001   XP_318657 60
D.melanogaster nmd 44021   NP_609373 57
S.cerevisiae MSP1 852915   NP_011542 51
N.crassa NCU07988 3878797   XP_962658 51
A.thaliana AT4G27680 828882   NP_194498 46
S.pombe SPCC24B10.10c 2539116   NP_588013 45
A.thaliana AT5G53540 835436   NP_200166 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)