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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PHF10, PHD finger protein 10
Sequence ID:NM_018288
Entrez Gene ID:55274
Ensembl ID:ENSG00000130024

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q27|Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 170107131 - 170124101

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3845815Full LengthBC020954PHD finger protein 10
5547708Full LengthBC110323PHD finger protein 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060758  

Protein Infomation

NM_018288 NP_060758 Q8WUB8 PHD
NM_133325 NP_579866    

Related Sequences

BC020954 AAH20954 Q8WUB8
BC110323 AAI10324 Q8WUB8
DQ891432 ABM82358  
DQ894607 ABM85533  
AK001837 BAA91934 Q8WUB8
AK222612 BAD96332 Q8WUB8
AK296349 BAG59032 B4DK20
CR457273 CAG33554 Q8WUB8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PHF10 NP_060758 R.norvegicus Phf10 292404   NP_001019918 98
M.musculus Phf10 72057 Gene Info NP_077212 96
C.elegans F33E11.6 3565141   NP_001041113 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)