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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IRX5, iroquois homeobox 5
Sequence ID:NM_001252197
NM_005853
RefSeqGene ID:NG_032773
Entrez Gene ID:10265
Ensembl ID:ENSG00000176842

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 54965110 - 54968395

Transcript StartTranscript EndChromosomal Start Chromosomal End
12495496511054965358
2506555496640954966814
65620605496698854968392

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005844  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252197 NP_001239126    
NM_005853 NP_005844 P78411 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U90304 AAB50002 P78411
U90309 AAB50007 P78411
BC131510 AAI31511 A2RRB5
AY335945 AAQ16551 P78411

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRX5 NP_005844 R.norvegicus Irx5 498918   NP_001025215 95
M.musculus Irx5 54352 Gene Info NP_061296 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)