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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SDK2, Sidekick cell adhesion molecule 2
Sequence ID:NM_001144952
Entrez Gene ID:54549
Ensembl ID:ENSG00000069188

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 71353508 - 71433908

 Exon Info From UCSC:
NM_001144952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069256Full LengthBC172562sidekick homolog 2 (chicken)
5501394IncompleteBC045763sidekick homolog 2 (chicken)
6172764IncompleteBC066363sidekick homolog 2 (chicken)
100068969BC172275sidekick homolog 2 (chicken)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001144952 NP_001138424 Q58EX2  

Related Sequences

 
mRNAGenPeptSwissProt
BC045763 AAH45763 Q58EX2
BC066363 AAH66363 Q58EX2
BC172275 AAI72275  
BC172562 AAI72562  
AK001694 BAA91841 Q58EX2
AB040947 BAA96038 Q58EX2
AK091827 BAG52422 B3KRL0
AL137357 CAB70709 Q58EX2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SDK2 NP_001138424 R.norvegicus Sdk2 360652   NP_001101773 95
M.musculus Sdk2 237979 Gene Info NP_766388 95
A.gambiae AgaP_AGAP000659 1272415   XP_311185 40
C.elegans rig-4 177597   NP_501339 31
D.melanogaster sdk 31017   NP_477290 8

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)