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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EPYC, Epiphycan
Sequence ID:NM_004950
Entrez Gene ID:1833
Ensembl ID:ENSG00000083782

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 91357497 - 91398760

NM_004950 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
176629135745791358102
6637589136382091363915
7599619136557691365778
96211209136659891366756
112112959137186491372038
129614739139617791396354
147415539139872391398802

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4604494Full LengthBC030958epiphycan

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004941  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004950 NP_004941 Q99645 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
U59111 AAC50945 Q99645
BC030958 AAH30958 Q99645
HQ257949 ADR82703  
AK290642 BAF83331 Q99645

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EPYC NP_004941 M.musculus Epyc 13516 Gene Info NP_031910 82
R.norvegicus Epyc 314772   NP_001101558 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta