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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASPN, Asporin
Sequence ID:NM_017680
NM_001193335
RefSeqGene ID:NG_023430
Entrez Gene ID:54829
Ensembl ID:ENSG00000106819

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
INTERVERTEBRAL DISC DISEASECILP
COL11A1
COL9A2
COL9A3
MMP9
THBS2
OSTEOARTHRITIS SUSCEPTIBILITY 3MATN3

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 95219543 - 95237197

 Exon Info From UCSC:
NM_017680
NM_001193335

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30404602Full LengthBC063114asporin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060150  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193335 NP_001180264    
NM_017680 NP_060150   LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC022059 AAH22059 Q05CQ6
BC063114 AAH63114 Q6P528
AY029191 AAK31800 Q9BXN1
AF316824 AAK35161 Q9BXN1
AY358329 AAQ88695 Q9BXN1
AK000136 BAA90967 Q9BXN1
AK027359 BAB55060 Q9BXN1
AK304501 BAG65309 B4E2Z7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASPN NP_060150 M.musculus Aspn 66695 Gene Info NP_001165952 92
R.norvegicus Aspn 306805   NP_001014030 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)