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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FHL1, four and a half LIM domains 1
Sequence ID:NM_001159699
NM_001159700
NM_001159701
NM_001159702
NM_001159703
NM_001159704
NM_001167819
NM_001449
NR_027621
RefSeqGene ID:NG_015895
Entrez Gene ID:2273
Ensembl ID:ENSG00000022267

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
EMERY-DREIFUSS MUSCULAR DYSTROPHY 6, X-LINKED 
MYOPATHY, REDUCING BODY, X-LINKED, SEVERE EARLY-ONSET 
MYOPATHY, REDUCING BODY, X-LINKED,CHILDHOOD-ONSET 
SCAPULOPERONEAL MYOPATHY, X-LINKED DOMINANT 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 135252089 - 135293103

 Exon Info From UCSC:
NM_001159699
NM_001159700
NM_001159701
NM_001159702
NM_001159703
NM_001159704
NM_001167819
NM_001449

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4039973Full LengthBC010998four and a half LIM domains 1
30529295Full LengthBC088369four and a half LIM domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001440  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159699 NP_001153171    
NM_001159700 NP_001153172    
NM_001159701 NP_001153173    
NM_001159702 NP_001153174 Q13642  
NM_001159703 NP_001153175    
NM_001159704 NP_001153176    
NM_001167819 NP_001161291    
NM_001449 NP_001440   LIM

Related Sequences

 
mRNAGenPeptSwissProt
U29538 AAC35421 Q13642
U60118 AAC50795 Q13642
U60115 AAC52021 Q13642
AF098518 AAC72390 Q13642
AF063002 AAC72886 Q13642
AF220153 AAF32351 Q13642
BC010998 AAH10998 Q13642
BC088369 AAH88369 Q13642
EU446858 ABZ92387  
EU831832 ACE86591  
EU832256 ACE86826  
EU832162 ACE87512  
AK223299 BAD97019 Q53FI7
AK289411 BAF82100 Q13642
AK091702 BAG52401 B3KRI9
AK122708 BAG53680 Q13642
AK297124 BAH12503 B7Z4B7
AK299379 BAH13019 B7Z5T3
AK299381 BAH13020 Q13642
AK299450 BAH13036 B7Z5V0
AK300966 BAH13384 B7Z6U8
AK301642 BAH13529 Q13642
AK304680 BAH14237 B7Z9A1
CR456974 CAG33255 Q13642

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FHL1 NP_001153173 R.norvegicus Fhl1 25177   NP_001029098 95
M.musculus Fhl1 14199 Gene Info NP_001070830 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)