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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLU7, SLU7 splicing factor homolog (S. cerevisiae)
Sequence ID:NM_006425
Entrez Gene ID:10569
Ensembl ID:ENSG00000164609

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 159830291 - 159842301

 Exon Info From UCSC:
NM_006425

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3871882Full LengthBC010634SLU7 splicing factor homolog (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006425 NP_006416 O95391  

Related Sequences

 
mRNAGenPeptSwissProt
AF101074 AAD13774 O95391
BC010634 AAH10634 O95391
AY486334 AAS59410 O95391
DQ174516 ABA08382 O95391
DQ174517 ABA08383 O95391
DQ891037 ABM81963  
DQ894216 ABM85142  
AK314564 BAG37147 B2RBA0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLU7 NP_006416 M.musculus Slu7 193116 Gene Info NP_683514 96
R.norvegicus Slu7 303057   NP_001094020 96
A.gambiae AgaP_AGAP004776 1278451   XP_318041 61
D.melanogaster Slu7 43427   NP_651659 57
A.thaliana SMP1 842877   NP_564859 51
A.thaliana SMP2 829866   NP_568017 50
C.elegans K07C5.6 179443   NP_505661 47
N.crassa NCU01950 3880383   XP_964234 42
S.pombe slu7 2540941   NP_596034 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)