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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGAP1, ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Sequence ID:NM_001037131
NM_001244888
NM_014914
RefSeqGene ID:NG_030314
Entrez Gene ID:116987
Ensembl ID:ENSG00000157985

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 236402759 - 237033891

 Exon Info From UCSC:
NM_001037131
NM_014914

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862550Full LengthBC167153ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
8862571Full LengthBC167157ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
9021724Full LengthBC140856ArfGAP with GTPase domain, ankyrin repeat and PH domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055729  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037131 NP_001032208 Q9UPQ3  
NM_001244888 NP_001231817    
NM_014914 NP_055729   Ank
Ras
PH
ArfGap
Miro

Related Sequences

 
mRNAGenPeptSwissProt
BC060814 AAH60814 Q9UPQ3
BC140856 AAI40857 Q9UPQ3
BC167153 AAI67153 B2RZG9
BC167157 AAI67157 B2RZG9
AY033765 AAK56506 Q9UPQ3
AF413078 AAL04172 Q9UPQ3
AB029022 BAA83051 Q9UPQ3
AK001722 BAA91862 Q9UPQ3
AK295520 BAG58435 B4DIC3
AK300763 BAG62428 B4DUR6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGAP1 NP_055729 M.musculus Agap1 347722 Gene Info NP_001032213 98
R.norvegicus Agap1 316611   NP_001101700 91
A.gambiae AgaP_AGAP009160 1280116   XP_319921 57
D.melanogaster cenG1A 34803   NP_723849 55
C.elegans cnt-2 176490   NP_001022837 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)