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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GIT2, G protein-coupled receptor kinase interacting ArfGAP 2
Sequence ID:NM_001135213
NM_001135214
NM_014776
NM_057169
NM_057170
NM_139201
RefSeqGene ID:NG_029885
Entrez Gene ID:9815
Ensembl ID:ENSG00000139436

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 110386627 - 110434029

 Exon Info From UCSC:
NM_001135213
NM_001135214
NM_014776
NM_057169
NM_057170
NM_139201

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051069Full LengthBC001379G protein-coupled receptor kinase interacting ArfGAP 2
4336368IncompleteBC014223G protein-coupled receptor kinase interacting ArfGAP 2
4524415IncompleteBC039880G protein-coupled receptor kinase interactor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_476510  NP_055591  NP_631940  NP_476511  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135213 NP_001128685    
NM_001135214 NP_001128686    
NM_014776 NP_055591   Ank
ArfGap
GIT_SHD
NM_057169 NP_476510 Q14161 Ank
ArfGap
GIT_SHD
NM_057170 NP_476511   Ank
ArfGap
GIT_SHD
NM_139201 NP_631940   Ank
ArfGap
GIT_SHD

Related Sequences

 
mRNAGenPeptSwissProt
AF124491 AAD28047 Q14161
BC001379 AAH01379 Q14161
BC014223 AAH14223 Q14161
BT007312 AAP35976 Q14161
D63482 BAA09769 Q14161
AK222736 BAD96456 Q6FI58
AK303198 BAG64289 B4E027
AK304240 BAG65109 B4E2E7
AB451294 BAG70108 B5BU58
AB451428 BAG70242 Q6FI58
CR533568 CAG38599 Q6FI58
CR749340 CAH18193 Q68DM7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GIT2 NP_476510 M.musculus Git2 26431 Gene Info NP_001070827 92
R.norvegicus Git2 304546   NP_001005553 92
A.gambiae AgaP_AGAP006888 1270193   XP_308871 43
D.melanogaster Git 36122   NP_610599 43
C.elegans git-1 181253   NP_509761 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta