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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. USP15, Ubiquitin specific peptidase 15
Sequence ID:NM_001252078
NM_006313
NM_001252079
Entrez Gene ID:9958
Ensembl ID:ENSG00000135655

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 62654195 - 62799898


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118994Full LengthBC125123ubiquitin specific peptidase 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006304  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001252078 NP_001239007 Q9Y4E8 EC 3.4.19.12  
NM_001252079 NP_001239008      
NM_006313 NP_006304     UCH
DUF1055

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF153604 AAD41086 Q9Y4E8 EC 3.4.19.12
AF106069 AAD52099 Q9Y4E8 EC 3.4.19.12
AF013990 AAG28973 Q9Y4E8 EC 3.4.19.12
BC020688 AAH20688 Q9H8G9  
BC063454 AAH63454 Q9H8G9  
BC110908 AAI10909 Q2NL66  
BC125123 AAI25124 Q9Y4E8 EC 3.4.19.12
AB011101 BAA25455 Q9Y4E8 EC 3.4.19.12
AK023703 BAB14648 Q9H8G9  
AK292337 BAF85026 Q9H8G9  
AK297759 BAG60108 B4DN46  
AK295947 BAH12226 B7Z3J0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP15 NP_006304 M.musculus Usp15 14479 Gene Info NP_081880 98
R.norvegicus Usp15 171329   NP_660185 98
A.thaliana UBP9 826649   NP_192795 45
A.thaliana UBP10 826651   NP_567363 45
A.thaliana UBP11 840179   NP_174562 43
S.cerevisiae UBP12 853242   NP_012338 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)