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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. INO80E, INO80 complex subunit E
Sequence ID:NM_173618
Entrez Gene ID:283899
Ensembl ID:ENSG00000169592

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 30012734 - 30017100

NM_173618 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11823000753030007711
1832533000786730007937
2543063000812830008180
3073853001207830012156
3864973001224930012360
4986143001273430012850
61511853001654130017111

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6155713Full LengthBC047712INO80 complex subunit E
5759915IncompleteBC035693coiled-coil domain containing 95

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173618 NP_775889 Q8NBZ0  

Related Sequences

 
mRNAGenPeptSwissProt
BC047712 AAH47712 Q8NBZ0
AY189289 AAO86733 Q6Y2K3
HQ448614 ADQ33092  
AK074033 BAB84859 Q8TET7
AK074137 BAB84963 Q8TEI7
AK075133 BAC11424 Q8NBZ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens INO80E NP_775889 R.norvegicus Ino80e 293494   NP_001013922 94
M.musculus Ino80e 233875 Gene Info NP_705808 92
D.melanogaster CG18004 36154   NP_610625 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)