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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSD3, pleckstrin and Sec7 domain containing 3
Sequence ID:NM_015310
NM_206909
Entrez Gene ID:23362
Ensembl ID:ENSG00000156011

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 18388219 - 18666386

 Exon Info From UCSC:
NM_015310
NM_206909

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30915359Full LengthBC075045pleckstrin and Sec7 domain containing 3
30915575Full LengthBC075044pleckstrin and Sec7 domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996792  NP_056125  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015310 NP_056125   Sec7
NM_206909 NP_996792   PH
Sec7

Related Sequences

 
mRNAGenPeptSwissProt
AF243495 AAF61269 Q9NYI0
BC011238 AAH11238 Q7L3Y3
BC075044 AAH75044 Q9NYI0
BC075045 AAH75045 Q9NYI0
AF519767 AAM74203 Q9NYI0
EU832237 ACE86807  
EU832242 ACE86812  
EU832144 ACE87494  
EU832149 ACE87499  
GU727648 ADU87649 Q9NYI0
AB023159 BAA76786 Q9NYI0
AK313826 BAG36561 Q7L3Y3
AK091317 BAG52336 B3KRC4
AK296546 BAG59170 B4DKF8
BX647320 CAI46004 Q5HYL1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSD3 NP_056125 M.musculus Psd3 234353 Gene Info NP_808366 82
R.norvegicus Psd3 306380   XP_224759 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)