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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C9orf3, chromosome 9 open reading frame 3
Sequence ID:NM_001193329
NM_001193331
NM_032823
NM_001193330
RefSeqGene ID:NG_027833
Entrez Gene ID:84909
Ensembl ID:ENSG00000148120

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 97522065 - 97844997

 Exon Info From UCSC:
NM_001193329
NM_001193331
NM_032823
NM_001193330

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3877098Full LengthBC029616chromosome 9 open reading frame 3
5020674Full LengthBC020194chromosome 9 open reading frame 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193329 NP_001180258 Q8N6M6  
NM_001193331 NP_001180260    
NM_032823 NP_116212    

Related Sequences

 
mRNAGenPeptSwissProt
BC020194 AAH20194 Q8N6M6
BC029616 AAH29616 Q8N6M6
AK027581 BAB55210 Q8N6M6
AK057450 BAB71491 Q8N6M6
AK296699 BAG59293 B4DKT1
AK296782 BAG59360 B4DKZ8
AK298959 BAG61055 B4DQU3
AK300486 BAG62201 B4DU39
AJ560639 CAD90259 Q8N6M6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf3 NP_001180258 R.norvegicus Npepo 290963   NP_001012346 78
M.musculus 2010111I01Rik 72061 Gene Info NP_082355 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)