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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ELAC2, elaC homolog 2 (E. coli)
Sequence ID:NM_001165962
NM_018127
NM_173717
RefSeqGene ID:NG_015808
Entrez Gene ID:60528
Ensembl ID:ENSG00000006744

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PROSTATE CANCERAR
BRCA2
CD82
CDH1
CHEK2
CHEK2
HIP1
HIP1
HNF1B
KLF6
KLF6
MAD1L1
MSR1
MXI1
MXI1
PTEN
TUSC3
TUSC3
ZFHX3
PROSTATE CANCER, HEREDITARY, 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 12895707 - 12921264

 Exon Info From UCSC:
NM_001165962
NM_018127
NM_173717

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820640Full LengthBC001939elaC homolog 2 (E. coli)
2820640Full LengthBC004158elaC homolog 2 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060597  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001165962 NP_001159434      
NM_018127 NP_060597 Q9BQ52 EC 3.1.26.11 Lactamase_B
NM_173717 NP_776065      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF304370 AAG24441 Q9BQ52 EC 3.1.26.11
BC001939 AAH01939 Q9BQ52 EC 3.1.26.11
BC004158 AAH04158 Q9BQ52 EC 3.1.26.11
JF432300 ADZ15517    
AK124838 BAC85964 Q9BQ52 EC 3.1.26.11
AK125030 BAC86026 Q9BQ52 EC 3.1.26.11
AK094333 BAG52861 B3KSU9  
AK094687 BAG52912 B3KT00  
AK298397 BAG60631 Q9BQ52 EC 3.1.26.11
AK300011 BAG61827 B4DT15  
AK304589 BAG65377 B4E365  
CR457261 CAG33542 Q9BQ52 EC 3.1.26.11

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ELAC2 NP_060597 M.musculus Elac2 68626 Gene Info NP_075968 84
R.norvegicus Elac2 282826   NP_758829 83
D.melanogaster JhI-1 36086   NP_724916 39
A.gambiae AgaP_AGAP009743 1279151   XP_318827 38
A.thaliana TRZ3 841647   NP_175628 37
A.thaliana TRZ4 820872   NP_188247 34
S.pombe trz2 2542457   NP_593023 32
C.elegans hoe-1 177241   NP_001023109 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)