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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C9orf89, chromosome 9 open reading frame 89
Sequence ID:NM_032310
Entrez Gene ID:84270
Ensembl ID:ENSG00000165233

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 95858499 - 95875562

NM_032310 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11859585844995858633
1863289586995595870097
3294829587284995873002
4835429587416095874219
5436149587449995874570
6159059587527395875563

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3833318Full LengthBC004500chromosome 9 open reading frame 89
5215640Full LengthBC038856chromosome 9 open reading frame 89
5212318IncompleteBC042201chromosome 9 open reading frame 89
30348167IncompleteBC091476chromosome 9 open reading frame 89

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032310 NP_115686 Q96LW7  

Related Sequences

 
mRNAGenPeptSwissProt
BC004500 AAH04500 Q96LW7
BC038856 AAH38856 Q96LW7
AK057716 BAB71550 Q96LW7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf89 NP_115686 M.musculus 1110007C09Rik 68480 Gene Info NP_081014 90
R.norvegicus RGD1306058 361224   NP_001128044 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)