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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PEBP1, phosphatidylethanolamine binding protein 1
Sequence ID:NM_002567
Entrez Gene ID:5037
Ensembl ID:ENSG00000089220

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 118573909 - 118583389

NM_002567 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1280118573869118574148
281390118575843118575952
391491118577255118577355
4921491118582390118583389

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822606Full LengthBC008714phosphatidylethanolamine binding protein 1
4074533Full LengthBC017396phosphatidylethanolamine binding protein 1
5300366Full LengthBC031102phosphatidylethanolamine binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002558  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002567 NP_002558 P30086 PBP

Related Sequences

 
mRNAGenPeptSwissProt
S76773 AAD14234 P30086
BC008714 AAH08714 P30086
BC017396 AAH17396 P30086
BC031102 AAH31102 P30086
HM131449 ADI99998 D9IAI1
D16111 BAA03684 P30086
AK311927 BAG34868 P30086
AK299414 BAG61396 B4DRT4
X75252 CAA53031 P30086
X85033 CAA59404 P30086

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEBP1 NP_002558 M.musculus Pebp1 23980 Gene Info NP_061346 86
R.norvegicus Pebp1 29542   NP_058932 83
D.melanogaster CG10298 40779   NP_649643 58
A.thaliana E12A11 838390   NP_173250 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)