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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EIF5, eukaryotic translation initiation factor 5
Sequence ID:NM_001969
NM_183004
Entrez Gene ID:1983
Ensembl ID:ENSG00000100664

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q32.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 103800546 - 103809508

 Exon Info From UCSC:
NM_001969
NM_183004

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4303500Full LengthBC007728eukaryotic translation initiation factor 5
5261866Full LengthBC032866eukaryotic translation initiation factor 5
3504816IncompleteBC000106eukaryotic translation initiation factor 5
3542638IncompleteBC015630eukaryotic translation initiation factor 5
5094332IncompleteBC041083eukaryotic translation initiation factor 5
6672764IncompleteBC107884eukaryotic translation initiation factor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_892116  NP_001960  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001969 NP_001960 P55010 eIF-5_eIF-2B
W2
NM_183004 NP_892116 P55010 eIF-5_eIF-2B
W2

Related Sequences

 
mRNAGenPeptSwissProt
U49436 AAC50572 P55010
BC007728 AAH07728 P55010
BC015630 AAH15630 Q05DF3
BC032866 AAH32866 P55010
BC107884 AAI07885 Q32Q19
DQ893482 ABM84408  
EU832369 ACE86854  
EU832284 ACE87541  
HQ448292 ADQ32772  
AK026933 BAB15593 P55010
AK293712 BAG57144 B4DEN3
AL080102 CAB45711 Q6IBU0
P55010
BX537367 CAD97610 P55010
CR456712 CAG32993 Q6IBU0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EIF5 NP_892116 M.musculus Eif5 217869 Gene Info NP_775539 98
R.norvegicus Eif5 56783   NP_064460 97
A.gambiae AgaP_AGAP011203 1270719   XP_309438 53
D.melanogaster eIF5 32566   NP_573098 52
C.elegans C37C3.2 179165   NP_741572 50
S.pombe SPAC2F7.05c 2541629   NP_592976 44
S.cerevisiae TIF5 856154   NP_015366 44
N.crassa NCU00366 3873415   XP_957252 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta