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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL37A, ribosomal protein L37a
Sequence ID:NM_000998
Entrez Gene ID:6168
Ensembl ID:ENSG00000197756

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 217363567 - 217366183

NM_000998 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
181217363519217363599
82210217363992217364120
211293217364671217364753
294416217366063217366185

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4654029Full LengthBC014262ribosomal protein L37a
4831278Full LengthBC016748ribosomal protein L37a
4856363Full LengthBC082239ribosomal protein L37a
5222439Full LengthBC063476ribosomal protein L37a
5299374Full LengthBC067789ribosomal protein L37a
3162085IncompleteBC000555ribosomal protein L37a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000989  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000998 NP_000989 P61513 Ribosomal_L37ae

Related Sequences

 
mRNAGenPeptSwissProt
L06499 AAA60280 P61513
BC000555 AAH00555 P61513
BC014262 AAH14262 P61513
BC016748 AAH16748 P61513
BC063476 AAH63476 Q6P4E4
BC067789 AAH67789 P61513
BC082239 AAH82239 P61513
D28355 BAA05721  
AK289472 BAF82161 P61513
AK291857 BAF84546 Q6P4E4
X66699 CAA47244 P61513
CR542152 CAG46949 P61513

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL37A NP_000989 M.musculus Gm14173 668941   XP_001004924 100
M.musculus Rpl37a 19981 Gene Info NP_033110 100
R.norvegicus LOC679823 679823   XP_001054789 97
D.melanogaster RpL37A 44783   NP_001188691 76
A.gambiae AgaP_AGAP009920 1279331   XP_319038 74
C.elegans rpl-43 175070   NP_496957 71
A.thaliana AT3G10950 820266   NP_187706 69
S.cerevisiae RPL43A 856156   NP_015368 69
S.cerevisiae RPL43B 853557   NP_012628 69
N.crassa NCU07562 3874754   XP_958607 64
P.falciparum PFB0455w 812691   XP_001349609 61
S.pombe rpl4302 2540665   NP_595634 61
S.pombe rpl4301 2540682   NP_595105 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)