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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPRR4, small proline-rich protein 4
Sequence ID:NM_173080
Entrez Gene ID:163778
Ensembl ID:ENSG00000184148

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 152943140 - 152944656

NM_173080 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
143152943127152943169
44766152944346152945068

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262727Full LengthBC069445small proline-rich protein 4
7262739Full LengthBC069549small proline-rich protein 4
8327638Full LengthBC112170small proline-rich protein 4
8327640Full LengthBC112172small proline-rich protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775103  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173080 NP_775103 Q96PI1 Cornifin

Related Sequences

 
mRNAGenPeptSwissProt
BC069445 AAH69445 Q96PI1
BC069549 AAH69549 Q96PI1
BC112170 AAI12171 Q96PI1
BC112172 AAI12173 Q96PI1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPRR4 NP_775103 R.norvegicus LOC100361607 100361607   XP_002729115 77
M.musculus Sprr4 229562 Gene Info NP_775093 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)