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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COX4I1, cytochrome c oxidase subunit IV isoform 1
Sequence ID:NM_001861
Entrez Gene ID:1327
Ensembl ID:ENSG00000131143

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 85833300 - 85840480

NM_001861 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11638583319585833357
1642378583481085834883
2384058583854285838709
4065378583933885839469
5387998584034385840604

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2990066Full LengthBC008704cytochrome c oxidase subunit IV isoform 1
4309698Full LengthBC021236cytochrome c oxidase subunit IV isoform 1
6451700Full LengthBC062437cytochrome c oxidase subunit IV isoform 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001852  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001861 NP_001852 P13073 COX4

Related Sequences

 
mRNAGenPeptSwissProt
M34600 AAA52059 P13073
M21575 AAA99312 P13073
U90915 AAB51058 P13073
BC008704 AAH08704 P13073
BC021236 AAH21236 P13073
BC047869 AAH47869 Q86WV2
BC062437 AAH62437 P13073
BT019825 AAV38628 P13073
DQ893162 ABM84088  
DQ896459 ABM87458  
AK311847 BAG34789 P13073
X54802 CAA38573 P13073

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COX4I1 NP_001852 R.norvegicus Cox4i1 29445   NP_058898 80
M.musculus Cox4i1 12857 Gene Info NP_034071 78
D.melanogaster CG10396 35491   NP_610168 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)