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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SAR1B, SAR1 homolog B (S. cerevisiae)
Sequence ID:NM_001033503
NM_016103
RefSeqGene ID:NG_017002
Entrez Gene ID:51128
Ensembl ID:ENSG00000152700

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 133942118 - 134006672

 Exon Info From UCSC:
NM_001033503
NM_016103

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3636540Full LengthBC002847SAR1 homolog B (S. cerevisiae)
30528518Full LengthBC093034SAR1 homolog B (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033503 NP_001028675 Q9Y6B6  
NM_016103 NP_057187 Q9Y6B6 Arf

Related Sequences

 
mRNAGenPeptSwissProt
AF092130 AAD40372 Q9Y6B6
BC002847 AAH02847 Q9Y6B6
BC093034 AAH93034 Q9Y6B6
AF087850 AAP97161 Q9Y6B6
EU832580 ACE86982  
EU832499 ACE87671  
AK223452 BAD97172 Q53F37
AK056821 BAG51815 Q9H029
AL512710 CAC21652 Q9H029

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SAR1B NP_001028675 R.norvegicus Sar1b 287276   NP_001009622 99
M.musculus Sar1b 66397 Gene Info NP_079811 99
A.thaliana AT3G62560 825430   NP_191815 63
A.thaliana SAR2 827368   NP_192117 62
P.falciparum sar1 812525   XP_001351475 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)