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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR1H2, nuclear receptor subfamily 1, group H, member 2
Sequence ID:NM_001256647
NM_007121
Entrez Gene ID:7376
Ensembl ID:ENSG00000131408

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 50880862 - 50885859


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3636961Full LengthBC007790nuclear receptor subfamily 1, group H, member 2
5178510Full LengthBC033500nuclear receptor subfamily 1, group H, member 2
5211737Full LengthBC074500nuclear receptor subfamily 1, group H, member 2
6469687Full LengthBC047750nuclear receptor subfamily 1, group H, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009052  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256647 NP_001243576    
NM_007121 NP_009052   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U14534 AAA58594 P55055
U07132 AAA61783 P55055
BC007790 AAH07790 P55055
BC033500 AAH33500 P55055
BC047750 AAH47750 P55055
BC074500 AAH74500 P55055
DQ890654 ABM81580  
HQ692835 ADZ17346 F1D8P7
AK290855 BAF83544 P55055
AK091535 BAG52378 B3KRG6
AK297978 BAG60288 B4DNM6
AB307697 BAH02288 B6ZGS7
CR456706 CAG32987 Q6IBU6
CR749648 CAH18442 Q68CY8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR1H2 NP_009052 R.norvegicus Nr1h2 58851   NP_113814 91
M.musculus Nr1h2 22260 Gene Info NP_033499 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)