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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SNX18, sorting nexin 18
Sequence ID:NM_001102575
Entrez Gene ID:112574
Ensembl ID:ENSG00000178996

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 53813782 - 53815669

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30341956Full LengthBC060791sorting nexin 18
30343220Full LengthBC067860sorting nexin 18
40125769Full LengthBC117218sorting nexin 18
40125771Full LengthBC117220sorting nexin 18

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443102  

Protein Infomation

NM_001102575 NP_001096045    
NM_001145427 NP_001138899    
NM_052870 NP_443102 Q96RF0 PX

Related Sequences

BC060791 AAH60791 Q96RF0
BC067860 AAH67860 Q96RF0
BC117218 AAI17219 Q96RF0
BC117220 AAI17221 Q96RF0
AF395536 AAK82415 Q96RF0
AK304195 BAG65075 B4E2B3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SNX18 NP_001096045 M.musculus Snx18 170625 Gene Info NP_570614 97
R.norvegicus Snx18 310097   NP_001101122 96
A.gambiae AgaP_AGAP011751 1280889   XP_320759 40
C.elegans lst-4 178361   NP_502693 39
D.melanogaster SH3PX1 39136   NP_648348 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)