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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LARS, leucyl-tRNA synthetase
Sequence ID:NM_020117
Entrez Gene ID:51520
Ensembl ID:ENSG00000133706

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 145493473 - 145562223

 Exon Info From UCSC:
NM_020117

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862534Full LengthBC152422leucyl-tRNA synthetase
40148007Full LengthBC151214leucyl-tRNA synthetase
40148958Full LengthBC150213leucyl-tRNA synthetase
5021130IncompleteBC068041leucyl-tRNA synthetase
6457465IncompleteBC105581leucyl-tRNA synthetase
40038385IncompleteBC110084leucyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064502  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020117 NP_064502 Q9P2J5 EC 6.1.1.4 Anticodon_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151026 AAF36112 Q9P0T1  
BC068041 AAH68041 Q6NVI4  
BC105581 AAI05582 Q0VGM8  
BC131798 AAI31799 A2RRR4  
BC150213 AAI50214 Q9P2J5 EC 6.1.1.4
BC151214 AAI51215 Q9P2J5 EC 6.1.1.4
BC152422 AAI52423 Q9P2J5 EC 6.1.1.4
AY513284 AAT08037 Q2TU79  
AY926480 AAX10025 Q2TU79  
AK001457 BAA91702 Q9NVP8  
AK001682 BAA91833 Q9NVC0  
AB037773 BAA92590 Q9P2J5 EC 6.1.1.4
D84223 BAA95667 Q9P2J5 EC 6.1.1.4
AK021413 BAB13817 Q9HAM7  
AK023777 BAB14674 Q9H8E3  
AK315178 BAG37619 B2RCM2  
AK127009 BAG54421 B3KXA9  
AK293750 BAG57172 B4DER1  
AK295874 BAG58672 B4DJ10  
AK304134 BAG65028 B4E266  
AL390155 CAB99091 Q9NPU8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LARS NP_064502 R.norvegicus Lars 291624   NP_001009637 90
M.musculus Lars 107045 Gene Info NP_598898 90
D.melanogaster CG33123 326262   NP_787968 60
A.gambiae AgaP_AGAP008297 1277687   XP_317169 59
C.elegans lrs-1 175538   NP_497837 58
S.pombe lrs1 2542670   NP_594882 52
A.thaliana AT1G09620 837489   NP_172433 50
N.crassa NCU09463 3879366   XP_963218 48
S.cerevisiae CDC60 855943   NP_015165 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)