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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITSN2, intersectin 2
Sequence ID:NM_006277
NM_019595
NM_147152
RefSeqGene ID:NG_029516
Entrez Gene ID:50618
Ensembl ID:ENSG00000198399

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2pter-p25.1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 24425734 - 24583304

 Exon Info From UCSC:
NM_006277
NM_019595
NM_147152

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9007231Full LengthBC146779intersectin 2
6055200IncompleteBC038963intersectin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062541  NP_006268  NP_671494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006277 NP_006268 Q9NZM3 SH3_1
efhand
C2
PH
RhoGEF
SH3_2
NM_019595 NP_062541   SH3_1
efhand
C2
PH
RhoGEF
SH3_2
NM_147152 NP_671494   SH3_1
efhand
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
U61167 AAC50593 Q9NZM3
AF001630 AAD00899 Q9NZM3
AF182198 AAF59903 Q9NZM3
AF182199 AAF59904 Q9NZM3
AF248540 AAF63600 Q9NZM3
BC020921 AAH20921 Q6PJ79
BC038963 AAH38963 Q8IWI5
BC146779 AAI46780 A6H8W8
AB033082 BAA86570 Q9NZM3
AK000302 BAA91068 Q9NZM3
AK021545 BAB13841 Q9NZM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITSN2 NP_062541 R.norvegicus Itsn2 313934   XP_002730178 94
M.musculus Itsn2 20403 Gene Info NP_035495 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)