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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HARS2, Histidyl-tRNA synthetase 2, mitochondrial
Sequence ID:NM_012208
RefSeqGene ID:NG_021415
Entrez Gene ID:23438
Ensembl ID:ENSG00000112855

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140071230 - 140078357

 Exon Info From UCSC:
NM_012208

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3628006Full LengthBC007680histidyl-tRNA synthetase 2, mitochondrial (putative)
4859849Full LengthBC014982histidyl-tRNA synthetase 2, mitochondrial (putative)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036340  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012208 NP_036340 P49590 EC 6.1.1.21 tRNA-synt_2b
HGTP_anticodon

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U18937 AAA73974 P49590 EC 6.1.1.21
BC007680 AAH07680 P49590 EC 6.1.1.21
BC014982 AAH14982 P49590 EC 6.1.1.21
DQ892641 ABM83567    
EU176716 ABW03517    
AK312976 BAG35813 B2R7G6  
AK293269 BAG56799 B4DDN8  
AK293390 BAG56899 B4DDY8  
AK298661 BAG60829 B4DQ67  
AK299971 BAG61797 B4DSY5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HARS2 NP_036340 M.musculus Hars2 70791 Gene Info NP_542367 85
R.norvegicus Hars2l 307491   NP_001014034 84
P.falciparum PF14_0428 812010   XP_001348602 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)