Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPR39, G protein-coupled receptor 39
Sequence ID:NM_001508
Entrez Gene ID:2863
Ensembl ID:ENSG00000183840

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q21-q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 133174615 - 133403179

NM_001508 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11325133174146133175470
13262820133402673133404167

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40116106Full LengthBC125046G protein-coupled receptor 39
40116108IncompleteBC125047G protein-coupled receptor 39

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001499  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001508 NP_001499 O43194 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF034633 AAC26082 O43194
BC125046 AAI25047 O43194
BC125047 AAI25048 A4FVA5
EU076432 ABU53902 A6QR72
FJ348258 ACI96302 O43194
AK314895 BAG37409 O43194
AK122643 BAG53636 B3KV24
BK005609 DAA06055 A6QR72

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPR39 NP_001499 M.musculus Gpr39 71111 Gene Info NP_081953 82
R.norvegicus Gpr39 288995   NP_001107864 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)