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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHRDL2, Chordin-like 2
Sequence ID:NM_015424
Entrez Gene ID:25884
Ensembl ID:ENSG00000054938

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 74407473 - 74424459

 Exon Info From UCSC:
NM_015424

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40147467Full LengthBC142623chordin-like 2
100016418Full LengthBC153100chordin-like 2
100014503BC141564chordin-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056239  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015424 NP_056239   VWC

Related Sequences

 
mRNAGenPeptSwissProt
AF332891 AAG50288 Q9BZ90
BC141564 AAI41565  
BC142623 AAI42624 Q6WN34
BC153100 AAI53101  
AY163868 AAO31809 Q6WN34
AY279090 AAQ19179 Q6WN34
AY279091 AAQ19180 Q6WN33
AY279092 AAQ19181 Q6WN34
AY279093 AAQ19182 Q6WN34
AY279094 AAQ19183 Q6WN34
AY358522 AAQ88886 Q6WN34
JN579714 AEV56635 G9I6H4
AK304519 BAG65323 B4E311
AL110168 CAB53666 Q9UG17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRDL2 NP_056239 M.musculus Chrdl2 69121 Gene Info NP_598470 71
R.norvegicus LOC100360934 100360934   XP_002728826 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)