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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MRPL40, Mitochondrial ribosomal protein L40
Sequence ID:NM_003776
RefSeqGene ID:NG_009231
Entrez Gene ID:64976
Ensembl ID:ENSG00000185608

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 19420065 - 19423596

NM_003776 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1951942003519420129
961791942078719420870
1803381942225819422416
3397721942316019423593

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3876531Full LengthBC009707mitochondrial ribosomal protein L40

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003776 NP_003767 Q9NQ50  

Related Sequences

 
mRNAGenPeptSwissProt
AF034091 AAC70904 Q9NQ50
BC009707 AAH09707 Q9NQ50
DQ891455 ABM82381  
DQ891653 ABM82579  
DQ894633 ABM85559  
AK123768 BAG53959 Q9NQ50
AJ295637 CAC00535 Q9NQ50
CR456532 CAG30418 Q9NQ50
CU013132 CAK54563  
CU013420 CAK54862  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL40 NP_003767 R.norvegicus Mrpl40 287962   NP_001020036 76
M.musculus Mrpl40 18100 Gene Info NP_035052 75
D.melanogaster mRpL40 41364   NP_524318 42
A.gambiae AgaP_AGAP000110 1272158   XP_311037 40
C.elegans F54C4.1 175174   NP_497138 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)