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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPECC1, Sperm antigen with calponin homology and coiled-coil domains 1
Sequence ID:NM_152904
NM_001243438
NM_001033554
NM_001243439
NM_001033553
NM_001033555
RefSeqGene ID:NG_029768
Entrez Gene ID:92521
Ensembl ID:ENSG00000128487

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 19990335 - 20140483

 Exon Info From UCSC:
NM_152904
NM_001033554
NM_001033553
NM_001033555

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3614358Full LengthBC021123cytospin B
5277450Full LengthBC050058cytospin B
4508298IncompleteBC033618cytospin B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033553 NP_001028725 Q5M775  
NM_001033554 NP_001028726    
NM_001033555 NP_001028727    
NM_001243438 NP_001230367    
NM_001243439 NP_001230368    
NM_152904 NP_690868    

Related Sequences

 
mRNAGenPeptSwissProt
BC021123 AAH21123 Q5M775
BC033618 AAH33618 Q5M775
BC050058 AAH50058 Q5M775
AY816326 AAW29999 Q5M775
AY816327 AAW30000 Q5M775
AY816328 AAW30001 Q5M775
AY816329 AAW30002 Q5M775
AB041533 BAB16440 Q5M775
AK295093 BAG58132 Q5M775
AK295811 BAG58629 B4DIW7
AK298601 BAG60786 B4DQ24
AK301318 BAG62869 B4DW07
AK304186 BAG65066 B4E2A4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPECC1 NP_001028725 M.musculus Specc1 432572 Gene Info NP_001025107 86
R.norvegicus Specc1 303208   NP_001034106 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)