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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PKNOX1, PBX/knotted 1 homeobox 1
Sequence ID:NM_004571
Entrez Gene ID:5316
Ensembl ID:ENSG00000160199

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 44394753 - 44450324

 Exon Info From UCSC:
NM_004571

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4099156Full LengthBC007746PBX/knotted 1 homeobox 1
3504770IncompleteBC000735PBX/knotted 1 homeobox 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004571 NP_004562 Q96I87
P55347
 

Related Sequences

 
mRNAGenPeptSwissProt
U68727 AAC51243 P55347
BC000735 AAH00735 Q6PKH2
BC007746 AAH07746 Q96I87
P55347
AY142115 AAN34940 P55347
AY196965 AAO45825 Q96I87
AY566249 AAT70235 Q5DNB2
DQ892709 ABM83635  
DQ895961 ABM86887  
AK222892 BAD96612 Q53GN9
AK294794 BAG57916 B4DGV5
Y13613 CAA73934 P55347

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PKNOX1 NP_004562 M.musculus Pknox1 18771 Gene Info NP_057879 96
R.norvegicus Pknox1 294322   NP_001013092 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)