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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCNC, cyclin C
Sequence ID:NM_001013399
NM_005190
Entrez Gene ID:892
Ensembl ID:ENSG00000112237

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 99991366 - 100016477

 Exon Info From UCSC:
NM_001013399
NM_005190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4106819Full LengthBC010135cyclin C
5759974Full LengthBC041123cyclin C
6157106Full LengthBC056153cyclin C
4250420IncompleteBC026272cyclin C
5022155IncompleteBC030159cyclin C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005181  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013399 NP_001013417    
NM_005190 NP_005181 Q7Z4L3
P24863
Cyclin_N

Related Sequences

 
mRNAGenPeptSwissProt
BC010135 AAH10135 Q7Z4L3
BC026272 AAH26272 Q05CF7
BC041123 AAH41123 Q7Z4L3
BC056153 AAH56153 Q7Z4L3
P24863
HQ448076 ADQ32557  
AB125137 BAD00144 Q7Z4L3
AK291914 BAF84603 A8K799
AK298558 BAG60753 P24863

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCNC NP_005181 M.musculus Ccnc 51813 Gene Info NP_058026 99
R.norvegicus Ccnc 114839   NP_001093942 99
D.melanogaster CycC 41801   NP_476848 73
A.gambiae CCNC_ANOGA 1274085   XP_313156 69
A.thaliana AT5G48630 834920   NP_199674 42
C.elegans cic-1 175357   NP_497548 41
A.thaliana AT5G48640 834921   NP_199675 41
S.cerevisiae SSN8 855706   NP_014373 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)