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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC142, Coiled-coil domain containing 142
Sequence ID:NM_032779
Entrez Gene ID:84865
Ensembl ID:ENSG00000135637

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74700916 - 74702813

NM_032779 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
219717469995974701928
197221717470204274702241
217223497470235174702528
235024647470273874702852
246525787470789574708008
257926887470808274708191
268928387470834974708498
283929257470857874708664
292643397470894374710356

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9051905Full LengthBC143398coiled-coil domain containing 142
40125820Full LengthBC117269coiled-coil domain containing 142

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032779 NP_116168    

Related Sequences

 
mRNAGenPeptSwissProt
BC117269 AAI17270 Q17RM4
BC143398 AAI43399 Q17RM4
HQ258495 ADR83249  
AK075543 BAC11686 Q17RM4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC142 NP_116168 R.norvegicus Ccdc142 297380   XP_232111 74
M.musculus Ccdc142 243510 Gene Info NP_001074735 74