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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PITPNA, phosphatidylinositol transfer protein, alpha
Sequence ID:NM_006224
RefSeqGene ID:NG_013017
Entrez Gene ID:5306
Ensembl ID:ENSG00000174238

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 1423680 - 1463095

 Exon Info From UCSC:
NM_006224

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5454273Full LengthBC045108phosphatidylinositol transfer protein, alpha
6578454Full LengthBC082976phosphatidylinositol transfer protein, alpha
4343128IncompleteBC027177phosphatidylinositol transfer protein, alpha
4818885IncompleteBC068538phosphatidylinositol transfer protein, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006215  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006224 NP_006215 Q00169 IP_trans

Related Sequences

 
mRNAGenPeptSwissProt
M73704 AAA36441 Q00169
BC045108 AAH45108 Q00169
BC068538 AAH68538 Q6NUL6
BC082976 AAH82976 Q00169
HQ447667 ADQ32152  
D30036 BAA06276 Q00169
AK303986 BAG64903 B4E1U1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PITPNA NP_006215 M.musculus Pitpna 18738 Gene Info NP_032876 99
R.norvegicus Pitpna 29525   NP_058927 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)