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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATF6B, Activating transcription factor 6 beta
Sequence ID:NM_004381
NM_001136153
Entrez Gene ID:1388
Ensembl ID:ENSG00000213676

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 31781121 - 32088197

 Exon Info From UCSC:
NM_004381
NM_001136153

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5766821Full LengthBC077075activating transcription factor 6 beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004372  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136153 NP_001129625    
NM_004381 NP_004372 Q99941 bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
U31903 AAA97438 Q99941
BC008394 AAH08394 Q96QL7
BC077075 AAH77075 Q6AZW6
BT007042 AAP35691 Q96QL7
X98054 CAA66664 Q99941

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATF6B NP_001129625 M.musculus Atf6b 12915 Gene Info NP_059102 88
R.norvegicus Atf6b 406169   NP_001002809 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)