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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH19, cadherin 19, type 2
Sequence ID:NM_001271028
NM_021153
NR_073130
Entrez Gene ID:28513
Ensembl ID:ENSG00000071991

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 64171558 - 64197166


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4716394Full LengthBC015877cadherin 19, type 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066976  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271028 NP_001257957    
NM_021153 NP_066976 Q9H159 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF047826 AAC05117 O60574
BC015877 AAH15877 Q96KY9
AY358654 AAQ89017 Q9H159
AK304000 BAG64917 B4E1V5
AJ007607 CAC13126 Q9H159

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH19 NP_066976 R.norvegicus Cdh19 360835   NP_001009448 76
M.musculus Cdh19 227485 Gene Info NP_001074855 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)