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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. OMA1, OMA1 zinc metallopeptidase homolog (S. cerevisiae)
Sequence ID:NM_145243
Entrez Gene ID:115209
Ensembl ID:ENSG00000162600

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32.2-p32.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 58946390 - 59012447

NM_145243 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
214755894639158946845
4766255897173158971880
6267005899293258993006
7018295899627258996400
8309375899962458999731
93811115899982959000002
111213405900218459002412
134118565900446659004981
185719285901237459012445

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4471592Full LengthBC012915OMA1 homolog, zinc metallopeptidase (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660286  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145243 NP_660286 Q96E52 Peptidase_M48

Related Sequences

 
mRNAGenPeptSwissProt
BC012915 AAH12915 Q96E52
JF432270 ADZ15487  
AK091101 BAC03583 Q96E52
AB048348 BAC79381 Q96E52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OMA1 NP_660286 R.norvegicus Oma1 298282   NP_001100139 73
M.musculus Oma1 67013 Gene Info NP_080185 72
S.pombe oma1 2541915   NP_593540 36
S.cerevisiae OMA1 853962   NP_013013 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)