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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCDC86, Coiled-coil domain containing 86
Sequence ID:NM_024098
Entrez Gene ID:79080
Ensembl ID:ENSG00000110104

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 60609543 - 60618554

NM_024098 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19276060942860610354
92810576061539660615525
105811326061741260617486
113320156061767860618560

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051044Full LengthBC001378coiled-coil domain containing 86

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024098 NP_077003 Q9H6F5  

Related Sequences

 
mRNAGenPeptSwissProt
BC001378 AAH01378 Q9H6F5
DQ501251 ABF68612 Q9H6F5
DQ892603 ABM83529  
DQ895844 ABM86770  
AK025974 BAB15304 Q9H6F5
AK123775 BAC85689 Q6ZW18
AK302329 BAG63661 B4DY99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCDC86 NP_077003 M.musculus Ccdc86 108673 Gene Info NP_076220 73
R.norvegicus Ccdc86 293738   NP_001006975 73
A.gambiae AgaP_AGAP004684 1268692   XP_307264 50
C.elegans Y40B1B.7 173211   NP_493363 46
D.melanogaster CG14210 32958   NP_608328 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)