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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPTLC3, serine palmitoyltransferase, long chain base subunit 3
Sequence ID:NM_018327
Entrez Gene ID:55304
Ensembl ID:ENSG00000172296

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 12989846 - 13031666

 Exon Info From UCSC:
NM_018327

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9057014Full LengthBC150644serine palmitoyltransferase, long chain base subunit 3
3961439IncompleteBC005205serine palmitoyltransferase, long chain base subunit 3

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_018327 NP_060797 Q9NUV7 EC 2.3.1.50  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC005205 AAH05205 Q9NUV7 EC 2.3.1.50
BC020656 AAH20656 Q9NUV7 EC 2.3.1.50
BC150644 AAI50645 Q9NUV7 EC 2.3.1.50
AK001974 BAA92012 Q9NUV7 EC 2.3.1.50
AK075271 BAC11509 Q8N2H1  
AK300184 BAG61962 B4DTF0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTLC3 NP_060797 R.norvegicus Sptlc3 296188   NP_001099987 71
M.musculus Sptlc3 228677 Gene Info NP_780676 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)