Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDLIM4, PDZ and LIM domain 4
Sequence ID:NM_001131027
NM_003687
RefSeqGene ID:NG_015836
Entrez Gene ID:8572
Ensembl ID:ENSG00000131435

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOPOROSISCALCR
COL1A1
COL1A2
IL6
LRP5
VDR

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 131593386 - 131609147

 Exon Info From UCSC:
NM_001131027
NM_003687

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3501794Full LengthBC003096PDZ and LIM domain 4
4132234Full LengthBC016765PDZ and LIM domain 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001131027 NP_001124499    
NM_003687 NP_003678 P50479 LIM
PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF154335 AAD34646 P50479
AF153882 AAD38070 P50479
BC003096 AAH03096 P50479
BC016765 AAH16765 P50479
BT007019 AAP35665 P50479
HQ447857 ADQ32341  
AK313508 BAG36288 P50479
X93510 CAA63767 P50479

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDLIM4 NP_003678 M.musculus Pdlim4 30794 Gene Info NP_062290 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)